Example #1 Final Input Form for eXPatGen

This input form was saved from the final parameters of an eXPatGen Run. Submit this form (button at the end of the page) to begin the simulation.

Simulated Condition #1 (Labeled Green):
Simulated Condition #2 (Labeled Red):

Environmental Matrix, Gene Groups Initially On (1) or Off (0)


Gene Group 1 2 3 4 5 6
Condition 1
Condition 2

Induction Matrix


Gene Group 1 2 3 4 5 6
Env. Condition 1
Env. Condition 2

Repression Matrix


Gene Group 1 2 3 4 5 6
Env. Condition 1
Env. Condition 2

Repression Behavior Parameters


Model: Sigmoidal
Time Offset for 50% Reduction [minutes]
Speed of Response

Induction Model Chosen for Each Group


Group 1 Model: Sigmoidal
Group 2 Model: Sigmoidal
Group 3 Model: Sigmoidal
Group 4 Model: Sigmoidal
Group 5 Model: Sigmoidal
Group 6 Model: Sigmoidal

Induction Behavior Parameters for Each Spot


Gene 1:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 2:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 3:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 4:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 5:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 6:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 7:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 8:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 9:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 10:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 11:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 12:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 13:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 14:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 15:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 16:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 17:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 18:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 19:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 20:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 21:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 22:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 23:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 24:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 25:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Gene 26:
Gene Name
Relative Gain
Time @ 50% Gain [minutes]
Speed of Response
Baseline Value

Comments or problems? Write to Dennis Michaud